[KYUUBI #6281][PY] Initialize github action for python unit testing
# 🔍 Description ## Issue References 🔗 This pull request fixes #6281 ## Describe Your Solution 🔧 The change initialize a CI job to run unit testing on python client, including: - Set up Github Action based on docker-compose - Update test cases and test succeeded for dialect `presto` and `trino` - Temporary disabled hive related test due to test cases are not valid, not about connection - Update dev dependencies to support python 3.10 - Speed up testing with `pytest-xdist` plugin ## Types of changes 🔖 - [ ] Bugfix (non-breaking change which fixes an issue) - [ ] New feature (non-breaking change which adds functionality) - [ ] Breaking change (fix or feature that would cause existing functionality to change) ## Test Plan 🧪 #### Behavior Without This Pull Request ⚰️ Not able to ran unit test in local and on CI #### Behavior With This Pull Request 🎉 Able to run and partially cover a couple of test cases #### Related Unit Tests No ## Additional notes Next action is about fixing failing test cases or considering skipping some of them if necessary --- # Checklist 📝 - [ ] This patch was not authored or co-authored using [Generative Tooling](https://www.apache.org/legal/generative-tooling.html) **Be nice. Be informative.** Closes #6343 from sudohainguyen/ci/init. Closes #6281 682e575c4 [Harry] Remove xdist out of scope dc42ca1ff [Harry] Pin pytest packages version 469f1d955 [Harry] Pin ubuntu version 00cef476a [Harry] Use v4 checkout action 96ef83148 [Harry] Remove unnecessary steps 732344a2c [Harry] Add step to tear down containers 1e2c2481a [Harry] Resolved trino and presto test 5b33e3924 [Harry] Make tests runnable 1be033ba3 [Harry] Remove randome flag which causes failed test run 2bc6dc036 [Harry] Switch action setup provider to docker ea2a76319 [Harry] Initialize github action for python unit testing Authored-by: Harry <quanghai.ng1512@gmail.com> Signed-off-by: Cheng Pan <chengpan@apache.org>
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65
.github/workflows/python.yml
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65
.github/workflows/python.yml
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#
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# Licensed to the Apache Software Foundation (ASF) under one or more
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# contributor license agreements. See the NOTICE file distributed with
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# this work for additional information regarding copyright ownership.
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# The ASF licenses this file to You under the Apache License, Version 2.0
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# (the "License"); you may not use this file except in compliance with
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# the License. You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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#
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name: Python Client
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on:
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push:
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branches:
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- master
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- branch-*
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pull_request:
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branches:
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- master
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- branch-*
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concurrency:
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group: python-${{ github.head_ref || github.run_id }}
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cancel-in-progress: true
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jobs:
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unit-test:
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runs-on: ubuntu-22.04
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strategy:
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fail-fast: false
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matrix:
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python-version: ["3.8", "3.9", "3.10"]
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env:
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PYTHONHASHSEED: random
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steps:
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- uses: actions/checkout@v4
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- name: Set up Python ${{ matrix.python-version }}
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uses: actions/setup-python@v2
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with:
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python-version: ${{ matrix.python-version }}
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- name: Start Testing Containers
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run: |
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cd python/docker/
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docker compose up -d --wait
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docker compose exec hive-server /opt/hive/scripts/make_test_tables.sh
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- name: Install dependencies
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run: |
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cd python
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./scripts/install-deps.sh
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- name: Run tests
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run: |
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cd python
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pytest -v
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- name: Tear down Containers
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run: |
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cd python/docker/
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docker compose down --volumes
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19
python/.gitignore
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19
python/.gitignore
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cover/
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.coverage
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/dist/
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/build/
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.DS_Store
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*.egg
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/env/
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/htmlcov/
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.idea/
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.project
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*.pyc
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.pydevproject
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/*.egg-info/
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.settings
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.cache/
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*.iml
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/scripts/.thrift_gen
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venv/
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.envrc
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@ -2,13 +2,11 @@
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flake8==3.4.1
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mock==2.0.0
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pycodestyle==2.3.1
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pytest==3.2.1
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pytest-cov==2.5.1
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pytest-flake8==0.8.1
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pytest-random==0.2
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pytest-timeout==1.2.0
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pytest==7.4.4
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pytest-cov==5.0.0
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# actual dependencies: let things break if a package changes
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sqlalchemy>=1.3.0
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requests>=1.0.0
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requests_kerberos>=0.12.0
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sasl>=0.2.1
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2
python/docker/conf/presto/catalog/hive.properties
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2
python/docker/conf/presto/catalog/hive.properties
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connector.name=hive-hadoop2
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hive.metastore.uri=thrift://hive-metastore:9083
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2
python/docker/conf/trino/catalog/hive.properties
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2
python/docker/conf/trino/catalog/hive.properties
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connector.name=hive-hadoop2
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hive.metastore.uri=thrift://hive-metastore:9083
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61
python/docker/docker-compose.yml
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61
python/docker/docker-compose.yml
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version: "3"
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services:
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namenode:
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image: bde2020/hadoop-namenode:2.0.0-hadoop2.7.4-java8
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volumes:
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- namenode:/hadoop/dfs/name
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environment:
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- CLUSTER_NAME=test
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env_file:
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- hadoop-hive.env
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ports:
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- "50070:50070"
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datanode:
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image: bde2020/hadoop-datanode:2.0.0-hadoop2.7.4-java8
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volumes:
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- datanode:/hadoop/dfs/data
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env_file:
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- hadoop-hive.env
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environment:
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SERVICE_PRECONDITION: "namenode:50070"
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ports:
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- "50075:50075"
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hive-server:
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image: bde2020/hive:2.3.2-postgresql-metastore
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env_file:
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- hadoop-hive.env
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volumes:
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- ../scripts:/opt/hive/scripts
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environment:
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HIVE_CORE_CONF_javax_jdo_option_ConnectionURL: "jdbc:postgresql://hive-metastore/metastore"
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SERVICE_PRECONDITION: "hive-metastore:9083"
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ports:
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- "10000:10000"
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hive-metastore:
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image: bde2020/hive:2.3.2-postgresql-metastore
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env_file:
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- hadoop-hive.env
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command: /opt/hive/bin/hive --service metastore
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environment:
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SERVICE_PRECONDITION: "namenode:50070 datanode:50075 hive-metastore-postgresql:5432"
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ports:
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- "9083:9083"
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hive-metastore-postgresql:
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image: bde2020/hive-metastore-postgresql:2.3.0
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presto-coordinator:
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image: shawnzhu/prestodb:0.181
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ports:
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- "8080:8080"
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volumes:
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- ./conf/presto/:/etc/presto
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trino:
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image: trinodb/trino:351
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ports:
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- "18080:18080"
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volumes:
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- ./conf/trino:/etc/trino
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volumes:
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namenode:
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datanode:
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30
python/docker/hadoop-hive.env
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python/docker/hadoop-hive.env
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HIVE_SITE_CONF_javax_jdo_option_ConnectionURL=jdbc:postgresql://hive-metastore-postgresql/metastore
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HIVE_SITE_CONF_javax_jdo_option_ConnectionDriverName=org.postgresql.Driver
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HIVE_SITE_CONF_javax_jdo_option_ConnectionUserName=hive
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HIVE_SITE_CONF_javax_jdo_option_ConnectionPassword=hive
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HIVE_SITE_CONF_datanucleus_autoCreateSchema=false
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HIVE_SITE_CONF_hive_metastore_uris=thrift://hive-metastore:9083
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HDFS_CONF_dfs_namenode_datanode_registration_ip___hostname___check=false
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CORE_CONF_fs_defaultFS=hdfs://namenode:8020
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CORE_CONF_hadoop_http_staticuser_user=root
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CORE_CONF_hadoop_proxyuser_hue_hosts=*
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CORE_CONF_hadoop_proxyuser_hue_groups=*
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HDFS_CONF_dfs_webhdfs_enabled=true
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HDFS_CONF_dfs_permissions_enabled=false
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YARN_CONF_yarn_log___aggregation___enable=true
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YARN_CONF_yarn_resourcemanager_recovery_enabled=true
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YARN_CONF_yarn_resourcemanager_store_class=org.apache.hadoop.yarn.server.resourcemanager.recovery.FileSystemRMStateStore
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YARN_CONF_yarn_resourcemanager_fs_state___store_uri=/rmstate
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YARN_CONF_yarn_nodemanager_remote___app___log___dir=/app-logs
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YARN_CONF_yarn_log_server_url=http://historyserver:8188/applicationhistory/logs/
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YARN_CONF_yarn_timeline___service_enabled=true
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YARN_CONF_yarn_timeline___service_generic___application___history_enabled=true
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YARN_CONF_yarn_resourcemanager_system___metrics___publisher_enabled=true
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YARN_CONF_yarn_resourcemanager_hostname=resourcemanager
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YARN_CONF_yarn_timeline___service_hostname=historyserver
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YARN_CONF_yarn_resourcemanager_address=resourcemanager:8032
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YARN_CONF_yarn_resourcemanager_scheduler_address=resourcemanager:8030
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YARN_CONF_yarn_resourcemanager_resource__tracker_address=resourcemanager:8031
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@ -17,6 +17,7 @@ import unittest
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from decimal import Decimal
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import mock
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import pytest
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import thrift.transport.TSocket
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import thrift.transport.TTransport
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import thrift_sasl
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@ -30,11 +31,12 @@ from pyhive.tests.dbapi_test_case import with_cursor
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_HOST = 'localhost'
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@pytest.mark.skip(reason="Temporary disabled")
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class TestHive(unittest.TestCase, DBAPITestCase):
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__test__ = True
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def connect(self):
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return hive.connect(host=_HOST, configuration={'mapred.job.tracker': 'local'})
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return hive.connect(host=_HOST, port=10000, configuration={'mapred.job.tracker': 'local'})
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@with_cursor
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def test_description(self, cursor):
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@ -151,10 +153,11 @@ class TestHive(unittest.TestCase, DBAPITestCase):
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self.assertIsNone(cursor.description)
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self.assertRaises(hive.ProgrammingError, cursor.fetchone)
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@pytest.mark.skip
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def test_ldap_connection(self):
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rootdir = os.path.dirname(os.path.dirname(os.path.dirname(__file__)))
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orig_ldap = os.path.join(rootdir, 'scripts', 'travis-conf', 'hive', 'hive-site-ldap.xml')
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orig_none = os.path.join(rootdir, 'scripts', 'travis-conf', 'hive', 'hive-site.xml')
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orig_ldap = os.path.join(rootdir, 'scripts', 'conf', 'hive', 'hive-site-ldap.xml')
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orig_none = os.path.join(rootdir, 'scripts', 'conf', 'hive', 'hive-site.xml')
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des = os.path.join('/', 'etc', 'hive', 'conf', 'hive-site.xml')
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try:
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subprocess.check_call(['sudo', 'cp', orig_ldap, des])
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@ -209,11 +212,12 @@ class TestHive(unittest.TestCase, DBAPITestCase):
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with contextlib.closing(conn.cursor()) as cursor:
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cursor.execute('SELECT * FROM one_row')
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self.assertEqual(cursor.fetchall(), [(1,)])
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@pytest.mark.skip
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def test_custom_connection(self):
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rootdir = os.path.dirname(os.path.dirname(os.path.dirname(__file__)))
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orig_ldap = os.path.join(rootdir, 'scripts', 'travis-conf', 'hive', 'hive-site-custom.xml')
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orig_none = os.path.join(rootdir, 'scripts', 'travis-conf', 'hive', 'hive-site.xml')
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orig_ldap = os.path.join(rootdir, 'scripts', 'conf', 'hive', 'hive-site-custom.xml')
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orig_none = os.path.join(rootdir, 'scripts', 'conf', 'hive', 'hive-site.xml')
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des = os.path.join('/', 'etc', 'hive', 'conf', 'hive-site.xml')
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try:
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subprocess.check_call(['sudo', 'cp', orig_ldap, des])
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@ -13,6 +13,7 @@ from decimal import Decimal
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import requests
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import pytest
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from pyhive import exc
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from pyhive import presto
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from pyhive.tests.dbapi_test_case import DBAPITestCase
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@ -231,6 +232,7 @@ class TestPresto(unittest.TestCase, DBAPITestCase):
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).cursor()
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)
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@pytest.mark.skip(reason='This test requires a proxy server running on localhost:9999')
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def test_requests_kwargs(self):
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connection = presto.connect(
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host=_HOST, port=_PORT, source=self.id(),
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@ -5,6 +5,7 @@ from pyhive.sqlalchemy_hive import HiveDate
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from pyhive.sqlalchemy_hive import HiveDecimal
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from pyhive.sqlalchemy_hive import HiveTimestamp
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from sqlalchemy.exc import NoSuchTableError, OperationalError
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import pytest
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from pyhive.tests.sqlalchemy_test_case import SqlAlchemyTestCase
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from pyhive.tests.sqlalchemy_test_case import with_engine_connection
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from sqlalchemy import types
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@ -60,6 +61,7 @@ _ONE_ROW_COMPLEX_CONTENTS = [
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# ]
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@pytest.mark.skip(reason="Temporarily disabled")
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class TestSqlAlchemyHive(unittest.TestCase, SqlAlchemyTestCase):
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def create_engine(self):
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return create_engine('hive://localhost:10000/default')
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@ -70,10 +70,10 @@ class TestTrino(TestPresto):
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('timestamp', 'timestamp', None, None, None, None, True),
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('binary', 'varbinary', None, None, None, None, True),
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('array', 'array(integer)', None, None, None, None, True),
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('map', 'map(integer,integer)', None, None, None, None, True),
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('struct', 'row(a integer,b integer)', None, None, None, None, True),
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('map', 'map(integer, integer)', None, None, None, None, True),
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('struct', 'row(a integer, b integer)', None, None, None, None, True),
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# ('union', 'varchar', None, None, None, None, True),
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('decimal', 'decimal(10,1)', None, None, None, None, True),
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('decimal', 'decimal(10, 1)', None, None, None, None, True),
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])
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rows = cursor.fetchall()
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expected = [(
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10
python/scripts/install-deps.sh
Executable file
10
python/scripts/install-deps.sh
Executable file
@ -0,0 +1,10 @@
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#!/bin/bash -eux
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source /etc/lsb-release
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sudo apt-get -q update
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sudo apt-get -q install -y g++ libsasl2-dev libkrb5-dev
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|
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pip install --upgrade pip
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pip install -r dev_requirements.txt
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pip install -e .
|
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@ -1,2 +0,0 @@
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connector.name=hive-hadoop2
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hive.metastore.uri=thrift://localhost:9083
|
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@ -1,2 +0,0 @@
|
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connector.name=hive-hadoop2
|
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hive.metastore.uri=thrift://localhost:9083
|
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@ -1,96 +0,0 @@
|
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#!/bin/bash -eux
|
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|
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source /etc/lsb-release
|
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|
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echo "deb [arch=amd64] https://archive.cloudera.com/${CDH}/ubuntu/${DISTRIB_CODENAME}/amd64/cdh ${DISTRIB_CODENAME}-cdh${CDH_VERSION} contrib
|
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deb-src https://archive.cloudera.com/${CDH}/ubuntu/${DISTRIB_CODENAME}/amd64/cdh ${DISTRIB_CODENAME}-cdh${CDH_VERSION} contrib" | sudo tee /etc/apt/sources.list.d/cloudera.list
|
||||
sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys 327574EE02A818DD
|
||||
sudo apt-get -q update
|
||||
|
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sudo apt-get -q install -y oracle-java8-installer python-dev g++ libsasl2-dev maven
|
||||
sudo update-java-alternatives -s java-8-oracle
|
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|
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#
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# LDAP
|
||||
#
|
||||
sudo apt-get -q -y --no-install-suggests --no-install-recommends --force-yes install ldap-utils slapd
|
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sudo mkdir -p /tmp/slapd
|
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sudo slapd -f $(dirname $0)/ldap_config/slapd.conf -h ldap://localhost:3389 &
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while ! nc -vz localhost 3389; do sleep 1; done
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sudo ldapadd -h localhost:3389 -D cn=admin,dc=example,dc=com -w test -f $(dirname $0)/../pyhive/tests/ldif_data/base.ldif
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sudo ldapadd -h localhost:3389 -D cn=admin,dc=example,dc=com -w test -f $(dirname $0)/../pyhive/tests/ldif_data/INITIAL_TESTDATA.ldif
|
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|
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#
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# Hive
|
||||
#
|
||||
|
||||
sudo apt-get -q install -y --force-yes hive
|
||||
|
||||
javac -cp /usr/lib/hive/lib/hive-service.jar $(dirname $0)/travis-conf/com/dropbox/DummyPasswdAuthenticationProvider.java
|
||||
jar cf $(dirname $0)/dummy-auth.jar -C $(dirname $0)/travis-conf com
|
||||
sudo cp $(dirname $0)/dummy-auth.jar /usr/lib/hive/lib
|
||||
|
||||
# Hack around broken symlink in Hive's installation
|
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# /usr/lib/hive/lib/zookeeper.jar -> ../../zookeeper/zookeeper.jar
|
||||
# Without this, Hive fails to start up due to failing to find ZK classes.
|
||||
sudo ln -nsfv /usr/share/java/zookeeper.jar /usr/lib/hive/lib/zookeeper.jar
|
||||
|
||||
sudo mkdir -p /user/hive
|
||||
sudo chown hive:hive /user/hive
|
||||
sudo cp $(dirname $0)/travis-conf/hive/hive-site.xml /etc/hive/conf/hive-site.xml
|
||||
sudo apt-get -q install -y --force-yes hive-metastore hive-server2 || (grep . /var/log/hive/* && exit 2)
|
||||
|
||||
while ! nc -vz localhost 9083; do sleep 1; done
|
||||
while ! nc -vz localhost 10000; do sleep 1; done
|
||||
|
||||
sudo -Eu hive $(dirname $0)/make_test_tables.sh
|
||||
|
||||
#
|
||||
# Presto
|
||||
#
|
||||
|
||||
sudo apt-get -q install -y python # Use python2 for presto server
|
||||
|
||||
mvn -q org.apache.maven.plugins:maven-dependency-plugin:3.0.0:copy \
|
||||
-Dartifact=com.facebook.presto:presto-server:${PRESTO}:tar.gz \
|
||||
-DoutputDirectory=.
|
||||
tar -x -z -f presto-server-*.tar.gz
|
||||
rm -rf presto-server
|
||||
mv presto-server-*/ presto-server
|
||||
|
||||
cp -r $(dirname $0)/travis-conf/presto presto-server/etc
|
||||
|
||||
/usr/bin/python2.7 presto-server/bin/launcher.py start
|
||||
|
||||
#
|
||||
# Trino
|
||||
#
|
||||
|
||||
sudo apt-get -q install -y python # Use python2 for trino server
|
||||
|
||||
mvn -q org.apache.maven.plugins:maven-dependency-plugin:3.0.0:copy \
|
||||
-Dartifact=io.trino:trino-server:${TRINO}:tar.gz \
|
||||
-DoutputDirectory=.
|
||||
tar -x -z -f trino-server-*.tar.gz
|
||||
rm -rf trino-server
|
||||
mv trino-server-*/ trino-server
|
||||
|
||||
cp -r $(dirname $0)/travis-conf/trino trino-server/etc
|
||||
|
||||
/usr/bin/python2.7 trino-server/bin/launcher.py start
|
||||
|
||||
#
|
||||
# Python
|
||||
#
|
||||
|
||||
pip install $SQLALCHEMY
|
||||
pip install -e .
|
||||
pip install -r dev_requirements.txt
|
||||
|
||||
# Sleep so Presto has time to start up.
|
||||
# Otherwise we might get 'No nodes available to run query' or 'Presto server is still initializing'
|
||||
while ! grep -q 'SERVER STARTED' /tmp/presto/data/var/log/server.log; do sleep 1; done
|
||||
|
||||
# Sleep so Trino has time to start up.
|
||||
# Otherwise we might get 'No nodes available to run query' or 'Presto server is still initializing'
|
||||
while ! grep -q 'SERVER STARTED' /tmp/trino/data/var/log/server.log; do sleep 1; done
|
||||
@ -2,20 +2,9 @@
|
||||
tag_build =
|
||||
|
||||
[tool:pytest]
|
||||
timeout = 100
|
||||
timeout_method = thread
|
||||
addopts = --random --tb=short --cov pyhive --cov-report html --cov-report term --flake8
|
||||
addopts = --tb=short --cov pyhive --cov-report html --cov-report term
|
||||
norecursedirs = env
|
||||
python_files = test_*.py
|
||||
flake8-max-line-length = 100
|
||||
flake8-ignore =
|
||||
TCLIService/*.py ALL
|
||||
pyhive/sqlalchemy_backports.py ALL
|
||||
presto-server/** ALL
|
||||
pyhive/hive.py F405
|
||||
pyhive/presto.py F405
|
||||
pyhive/trino.py F405
|
||||
W503
|
||||
filterwarnings =
|
||||
error
|
||||
# For Python 2 flake8
|
||||
|
||||
Loading…
Reference in New Issue
Block a user